IITA NEWS

IITA trains stakeholders on the power of molecular markers in banana breeding and seed systems
May 3, 2024

Genetic purity is one of the utmost requirements for quality seeds. In bananas, the penalty of growing the wrong varieties is high because of the long cycle of the crop. Mixing up of the planting material is noticed at least a year after planting. The economic loss is even greater, considering the cost and time of multiplying banana planting material in the laboratory using tissue culture techniques.

Participants in a group photo during the molecular markers for quality assurance and quality control (QA/QC) in bananas workshop. (G.Ndibalema/IITA)
Participants in a group photo during the molecular markers for quality assurance and quality control (QA/QC) in bananas workshop. (G.Ndibalema/IITA)

To address this issue, IITA, in collaboration with Tanzania Agricultural Research Institute, organized a two-day workshop on using molecular markers for quality assurance and quality control (QA/QC) in bananas from 17 to 18 April in Arusha, Tanzania. The workshop was led by IITA Banana Molecular Breeder Brigitte Uwimana and head of banana research at TARI Dr Mpoki Shimwela, and attended by 21 participants comprising seed certification policy influencers and policymakers, technicians, and quality controllers in research and commercial tissue culture laboratories in Tanzania.

The objective of the workshop was to create awareness about the importance of the genetic purity of banana planting material, to encourage the incorporation of molecular markers as a quality control measure in seed certification, and to equip the technicians to use molecular markers designed for bananas to track the purity of the banana hybrids under field evaluation and throughout the banana seed system chain, starting from the mother gardens, through the tissue culture labs, to the distributing nurseries. The participants were reminded about using molecular markers and introduced to the newly developed Kompetitive Allele-Specific Polymorphism (KASP) markers for QA/QC in bananas. In a hands-on session, the technical participants practiced the process of leaf sampling and handling, placing a genotyping order, processing the genotyping data, and interpreting the results.

Molecular markers not only ensure the genetic purity of the planting material through fingerprinting, but they also improve breeding efficiency. “We made significant progress in developing Matooke and Mchare hybrids that are high-yielding and resistant to pests and diseases. Four Matooke hybrids developed in Uganda by IITA and National Agricultural Research Organization (NARO) were released.

 A technician from Maua Mazuri in the practical session on leaf sampling and handling during the QA/QC in bananas workshop. (G.Ndibalema)
A technician from Maua Mazuri in the practical session on leaf sampling and handling during the QA/QC in bananas workshop. (G.Ndibalema)

“The first improved Mchare hybrids that are resistant to Fusarium wilt are currently being evaluated by TARI. This work took us nine years. But we need to accelerate our breeding efforts using molecular markers, which will speed up the integration of the desired traits,” narrated IITA Banana Breeder Allan Brown. Uwimana highlighted that molecular markers shorten breeding cycles by identifying the necessary DNA in the breeds at the initial stage, making the process cost-effective. “The markers reduce breeding cost and enhance efficiency. They enable us to discard unwanted hybrids at an early stage of evaluation rather than waiting for years of field trials,” explained Uwimana.

During the workshop, the participants gained insights into the breeding process of Matooke and Mchare bananas and the on-farm testing, release, and promotion of banana hybrids. The participants appreciated the efforts put into the whole process and the importance of evaluating, releasing, and distributing the correct genetic material.

The training was timely as the Tanzania Official Seed Certification Institute (TOSCI) recently released improved cooking banana hybrids developed by IITA and the Ugandan research institute, which TARI later evaluated under different agroecological conditions.

In his workshop reflections, Head of Plant Breeder’s Rights at TOSCI, Twalib Njohole, noted that the training was well timed as the institute has just approved the banana seed certification guidelines. Using molecular markers in quality assurance and control will help the institute and stakeholders prepare fingerprinting of the already released banana varieties for easy, assured, and fast identification of the hybrid plantlets produced by banana commercial tissue culture companies.

The participants expressed the importance of collaboration among breeding centers and companies working on crop variety quality control and assurance. This includes mutually understanding each other’s work and cooperation in sending their samples to a trusted genotyping platform to reduce operational costs, following the proven working model adopted by the One-CGIAR.

With the establishment of the East African Breeding network on Banana Breeding to accelerate the evaluation and release of the cooking banana hybrids, such training should be extended to all member countries to ensure the genetic purity of the planting material as they are distributed within their respective country seed systems.

Contributed by Gloriana Ndibalema


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Olaosebikan, Olamide

Olamide Deborah Nwanze is a Senior Research Associate specializing in gender mainstreaming research to inform participatory and inclusive breeding, variety development, and seed systems policies regarding root, tuber, and banana (RTB) crops in the International Institute of Tropical Agriculture Headquarters, Ibadan, Nigeria. She is a PhD candidate at the University of Ibadan and holds an MSc and B. Agric in Agricultural Extension and Rural Development. Olamide is a fellow of the African Women in Agricultural Research and Development – Gender Responsive Agricultural Systems Policy (AWARD-GRASP) and the Gender Responsive Researchers Equipped for Agricultural Transformation (GREAT). She seeks to apply her gender-mainstreaming learnings, gender-responsive research, and policy development, and review expertise to facilitate women, youth, children, and vulnerable social group’s access to and adoption of agricultural Innovations that guarantee food, nutrition, income, and livelihood security in Africa. Her current roles include mentoring research fellows, development of guides and training manuals, implementation and adaptation of gender frameworks and tools, value chain actors’ engagement as citizen science partners, policy review and redesign, data management, and analysis. Her current research explores mixed methods and participatory and interdisciplinary approaches to capture and highlight gender dynamics, needs, preferences, and challenges stakeholders face within the agricultural livelihood value chain to prioritize gender-inclusive strategies in breeding programs, policy design, and implementation.

At IITA, she contributes to the implementation of the CGIAR Accelerated Breeding Initiative and Genetic Innovation Programs; participatory and gender research within the NextGen CassavaHarvestPlusRTBFoods, and Tricot-ClimMob 1000Farms Projects; and gender knowledge communication via the G-LENS webinar series, video documentary, policy briefspublications, and blogs.

 

Recent publications

de Sousa, K., van Etten, J., Manners, R. Bello, A., Teeken, B., Olaosebikan, O., et al. 2024. The tricot approach: an agile framework for decentralized on-farm testing supported by citizen science. A retrospective. Agron. Sustain. Dev. 44, 8. https://doi.org/10.1007/s13593-023-00937-1

Madu, T., Onwuka, S., Nwafor, S., Onyemauwa, N., Ejechi, M., Ofoeze, M., Ukeje, B., Eluagu, C., Olaosebikan, O., Okoye, B., 2024. Gender-Inclusive Consumer Studies Improve Cassava Breeding in Nigeria in: Frontiers in Sociology, volume 9, number: 1224504, doi: 10.3389/fsoc.2024.1224504

Olaosebikan, O.; Bello, A.; Utoblo, O.; Okoye, B.; Olutegbe, N.; Garner, E.; Teeken, B.; Bryan, E.; Forsythe, L.; Cole, S.; Madu, T. 2023.  Stressors and Resilience within the Cassava Value Chain in Nigeria: Preferred Cassava Variety Traits and Response Strategies of Men and Women to Inform Breeding. Sustainability 15, 7837. https://doi.org/10.3390/su15107837

Okoye, B., Ofoeze, M., Ejechi, M., Onwuka, S., Nwafor, S., Onyemauwa, N., Ukeje, B., Eluagu, C., Obidiegwu, J.*, Olaosebikan, O., Madu, T.* 2023. Prioritizing preferred traits in the yam value chain in Nigeria: a gender situation analysis in: Frontiers in Sociology, volume 8, number: 1232626, pages 1 – 9, ISSN 2297-7775, 2023. https://www.frontiersin.org/articles/10.3389/fsoc.2023.1232626/full

Olaosebikan, O., Bello, A. A., de Sousa, K., Ndjouenkeu, R., Adesokan, M., Alamu, E. O., Agbona, A., van Etten, J., Kegah, F. N.*, Dufour, D., Bouniol, A., Teeken, B. 2023. Consumer acceptability of cassava gari-eba food products across cultural and environmental settings using the triadic comparison of technologies approach (tricot) in: Journal of the Science of Food and Agriculture,

Teeken, B., Olaosebikan, O., Bello, A. A., Madu, T.*, Cole, S. M. 2023. Qualitative assessment on the positionality and preferences of dyads in relation to cassava-related activities: working with tricot trial citizen scientists https://hdl.handle.net/10568/138326 Type: Manual

Bouniol, A., Ceballos, H., Bello, A. A., Teeken, B., Olaosebikan, O., Owoade, D., Agbona, A., Fotso Kuate, A., Madu, T.*, Okoye, B.*, Ofoeze, M.*, Nwafor, S.*, Onyemauwa, N.*, Adinsi, L.*, Forsythe, L., Dufour, D. 2023. Varietal impact on women’s labour, workload and related drudgery in processing root, tuber and banana crops: focus on cassava in sub-Saharan Africa in: Journal of the Science of Food and Agriculture, pages 1 – 25, ISSN 0022-5142,

Bello, A. A., Agbona, A., Olaosebikan, O., Edughaen, G., Dufour, D., Bouniol, A., Iluebbey, P., Ndjouenkeu, R.*, Rabbi, I. Y., Teeken, B. 2023. Genetic and environmental effects on processing productivity and food product yield: drudgery of women’s work in: Journal of the Science of Food and Agriculture, pages 1 – 32, ISSN 0022-5142, 5

Cavicchioli, M., Zimbiti, T., Teeken, B., Nwanze, D.O., Liani, M., Parkes, E. & Bello, A. 2023. IITA-Gender Responsive Breeding Training Report. Genetic Resources Center, IITA-HQ, Ibadan, 21-23 September, 2022. Ibadan, Nigeria: IITA, (34 p.).https://hdl.handle.net/10568/131368

Agbona, A. Peteti P., Teeken B., Olaosebikan O. Bello, A. A., Parkes, E., Rabbi, I. Y., Mueller, L., Egesi, C., Kulakow, P. 2022. Data Management in Multi-disciplinary African RTB Crop Breeding Programs. In: Williamson, H.F., Leonelli, S. (eds) Towards Responsible Plant Data Linkage: Data Challenges for Agricultural Research and Development. Springer, Cham. https://doi.org/10.1007/978-3-031-13276-6_5

Lora Forsythe, Pricilla Marimo, Sarah Mayanja, Olamide D. Olaosebikan, Esme Stuart, Bela Teeken, Benjamin Okoye, Tessy Madu, (2021). Cross-product Gender Analysis of RTBfoods Step 2 Gendered Food Mapping on RTB Products. Understanding the Drivers of Trait Preferences and the Development of Multi-user RTB Product Profiles, WP1. London, UK: RTBfoods Field Scientific Report, 30 p.

Teeken, B., Garner, E., Agbona, A., Balogun, I., Olaosebikan, O., Bello, A., Madu, T., Okoye, B., Egesi, C., Kulakow, P. and Tufan, H.A. 2021. Beyond “Women’s Traits”: Exploring How Gender, Social Difference, and Household Characteristics Influence Trait Preferences. Frontiers Sustainable Food Systems 5:740926. https://doi.org/10.3389/fsufs.2021.740926

Teeken, B., Agbona, A., Bello, A., Olaosebikan, O., Alamu, E., Adesokan, M., Awoyale, W., Madu, T., Okoye, B., Chijioke, U., Owoade, D., Okoro, M., Bouniol, A., Dufour, D., Hershey, C., Rabbi, I., Maziya‐Dixon, B., Egesi, C., Tufan, H. and Kulakow, P. (020. Understanding cassava varietal preferences through pairwise ranking of gari‐eba and fufu prepared by local farmer–processors. Int J Food Sci Technol. https://doi.org/10.1111/ijfs.14862

Bela Teeken, Olamide Olaosebikan, Ireti Balogun, Benjamin Okoye, Tessy Madu, Steven Cole, Abolore Bello, Elizabeth Parkes. (2020). Piloting the G+ customer and product profile tools for gender-responsive cassava breeding in Nigeria. Nigeria: International Institute of Tropical Agriculture (IITA). https://hdl.handle.net/20.500.11766/13000